vignette bug fixes

keyes-timothy · Aug 25, 2024 · ace89c7 · ace89c7
1 parent cd770dc
commit ace89c7
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Showing 11 changed files with 49 additions and 3 deletions.
diff --git a/vignettes/clustering.Rmd b/vignettes/clustering.Rmd
@@ -17,6 +17,10 @@ knitr::opts_chunk$set(
     collapse = TRUE,
     comment = "#>"
 )
+
+options(
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup, message = FALSE, warning = FALSE}

diff --git a/vignettes/contributing-to-tidytof.Rmd b/vignettes/contributing-to-tidytof.Rmd
@@ -14,6 +14,11 @@ knitr::opts_chunk$set(
     collapse = TRUE,
     comment = "#>"
 )
+
+options(
+  rmarkdown.html_vignette.check_title = FALSE
+)
+
 ```
 
 

diff --git a/vignettes/differential-discovery-analysis.Rmd b/vignettes/differential-discovery-analysis.Rmd
@@ -18,6 +18,10 @@ knitr::opts_chunk$set(
     collapse = TRUE,
     comment = "#>"
 )
+
+options(
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup, message = FALSE}

diff --git a/vignettes/dimensionality-reduction.Rmd b/vignettes/dimensionality-reduction.Rmd
@@ -17,6 +17,10 @@ knitr::opts_chunk$set(
     collapse = TRUE,
     comment = "#>"
 )
+
+options(
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup, message = FALSE}

diff --git a/vignettes/downsampling.Rmd b/vignettes/downsampling.Rmd
@@ -20,6 +20,10 @@ knitr::opts_chunk$set(
     fig.height = 4,
     fig.width = 4
 )
+
+options(
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup, message = FALSE}

diff --git a/vignettes/feature-extraction.Rmd b/vignettes/feature-extraction.Rmd
@@ -17,6 +17,10 @@ knitr::opts_chunk$set(
     collapse = TRUE,
     comment = "#>"
 )
+
+options(
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup}

diff --git a/vignettes/modeling.Rmd b/vignettes/modeling.Rmd
@@ -17,6 +17,10 @@ knitr::opts_chunk$set(
     collapse = TRUE,
     comment = "#>"
 )
+
+options(
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup}

diff --git a/vignettes/preprocessing.Rmd b/vignettes/preprocessing.Rmd
@@ -18,7 +18,12 @@ knitr::opts_chunk$set(
     comment = "#>"
 )
 
-options(tibble.print_min = 4L, tibble.print_max = 4L)
+options(
+  tibble.print_min = 4L, 
+  tibble.print_max = 4L, 
+  rmarkdown.html_vignette.check_title = FALSE
+)
+
 ```
 
 ```{r setup, message = FALSE}

diff --git a/vignettes/quality-control.Rmd b/vignettes/quality-control.Rmd
@@ -19,6 +19,10 @@ knitr::opts_chunk$set(
     message = FALSE,
     comment = "#>"
 )
+
+options(
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup}

diff --git a/vignettes/reading-and-writing-data.Rmd b/vignettes/reading-and-writing-data.Rmd
@@ -18,7 +18,11 @@ knitr::opts_chunk$set(
     comment = "#>"
 )
 
-options(tibble.print_min = 4L, tibble.print_max = 4L)
+options(
+  tibble.print_min = 4L, 
+  tibble.print_max = 4L, 
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup, message = FALSE}

diff --git a/vignettes/tidytof.Rmd b/vignettes/tidytof.Rmd
@@ -20,7 +20,11 @@ knitr::opts_chunk$set(
     comment = "#>"
 )
 
-options(tibble.print_min = 4L, tibble.print_max = 4L)
+options(
+  tibble.print_min = 4L, 
+  tibble.print_max = 4L, 
+  rmarkdown.html_vignette.check_title = FALSE
+)
 ```
 
 ```{r setup, message = FALSE, include = FALSE}