adding singlem

linsalrob · Sep 9, 2024 · 187ed8e · 187ed8e
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commit 187ed8e
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/Workshops/COMBINE_QLD_2024.md b/Workshops/COMBINE_QLD_2024.md
@@ -125,6 +125,9 @@ Before you use it, make sure you add this command:
 
 Now run singleM on the CF data:
 
+```
+singlem pipe -1 /storage/data/cf_data/CF_Data_R1.fastq.gz -2 /storage/data/cf_data/CF_Data_R2.fastq.gz -p output_profile.tsv
+```