Merge pull request #67 from ahernank/af-data-pages

Af1.x data pages
malariagen · Jun 12, 2024 · e141652 · e141652
2 parents 32365ab + c983bc7
commit e141652
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diff --git a/docs/_toc.yml b/docs/_toc.yml
@@ -21,6 +21,15 @@ parts:
     - file: ag3/methods
     - file: ag3/api
     - file: ag3/analysis
+  - caption: Anopheles funestus
+    chapters:
+    - file: af1/af1.0
+    - file: af1/af1.1
+    - file: af1/af1.2
+    - file: af1/af1.3
+    - file: af1/cloud
+    - file: af1/download
+    - file: af1/api
   - caption: Anopheles minimus
     chapters:
     - file: amin1/intro

diff --git a/docs/af1/af1.0.ipynb b/docs/af1/af1.0.ipynb
diff --git a/docs/af1/af1.1.ipynb b/docs/af1/af1.1.ipynb
diff --git a/docs/af1/af1.2.ipynb b/docs/af1/af1.2.ipynb
diff --git a/docs/af1/af1.3.ipynb b/docs/af1/af1.3.ipynb
diff --git a/docs/af1/api.md b/docs/af1/api.md
@@ -0,0 +1,3 @@
+# Af1 API
+
+For documentation on functions in the [malariagen_data](https://github.com/malariagen/malariagen-data-python) Python package for accessing *Anopheles funestus* data, please visit the [Af1 API docs page](https://malariagen.github.io/malariagen-data-python/latest/Af1.html).
diff --git a/docs/af1/cloud.ipynb b/docs/af1/cloud.ipynb
diff --git a/docs/af1/download.ipynb b/docs/af1/download.ipynb
diff --git a/docs/ag3/ag3.0.ipynb b/docs/ag3/ag3.0.ipynb
@@ -110,7 +110,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install -q malariagen_data"
+    "%pip install -q malariagen_data"
    ]
   },
   {
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		@@ -0,0 +1,3 @@
		# Af1 API

		For documentation on functions in the [malariagen_data](https://github.com/malariagen/malariagen-data-python) Python package for accessing Anopheles funestus data, please visit the [Af1 API docs page](https://malariagen.github.io/malariagen-data-python/latest/Af1.html).