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@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

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  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 238 54

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 48 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 52 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 15 2

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 19 6

Repositories

Showing 10 of 240 repositories
  • monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    monarch-initiative/monarch-ingest’s past year of commit activity
    Python 15 2 32 3 Updated Jan 10, 2025
  • mondo-ingest Public

    Coordinating the mondo-ingest with external sources

    monarch-initiative/mondo-ingest’s past year of commit activity
    Jupyter Notebook 6 3 229 (1 issue needs help) 17 Updated Jan 10, 2025
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Python 19 BSD-3-Clause 6 194 (3 issues need help) 10 Updated Jan 10, 2025
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 238 CC-BY-4.0 54 423 (2 issues need help) 36 Updated Jan 10, 2025
  • oncoexporter Public

    A package to convert cancer data to GA4GH phenopacket

    monarch-initiative/oncoexporter’s past year of commit activity
    Jupyter Notebook 7 MIT 1 22 3 Updated Jan 10, 2025
  • koza Public

    Data transformation framework for LinkML data models

    monarch-initiative/koza’s past year of commit activity
    Python 48 BSD-3-Clause 4 37 (1 issue needs help) 3 Updated Jan 10, 2025
  • monarch-neo4j Public

    Dockerized Managed Neo4j Database for Monarch

    monarch-initiative/monarch-neo4j’s past year of commit activity
    Shell 2 BSD-3-Clause 0 1 0 Updated Jan 10, 2025
  • phenopacket-store Public

    Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.

    monarch-initiative/phenopacket-store’s past year of commit activity
    Jupyter Notebook 18 BSD-3-Clause 4 14 0 Updated Jan 10, 2025
  • pyphetools Public

    Python Phenopacket Tools

    monarch-initiative/pyphetools’s past year of commit activity
    Python 11 MIT 1 3 0 Updated Jan 10, 2025
  • maxo-annotation-ingest Public
    monarch-initiative/maxo-annotation-ingest’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Jan 10, 2025
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