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Merge branch 'jdaw/fix-README' into 'master'
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[README] fix samtools split cmd

See merge request machine-learning/dorado!640
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tijyojwad committed Oct 10, 2023
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Expand Up @@ -164,7 +164,7 @@ The default heuristic for double-ended barcodes is to look for them on either en
The output from `dorado basecaller` can be demultiplexed into per-barcode BAMs using `samtools split`. e.g.

```
$ samtools split -u <basecalled-bam> -f <output-dir>/<prefix>_%!.bam
$ samtools split -u <output-dir>/unclassified.bam -f "<output-dir>/<prefix>_%!.bam" <input-bam>
```

#### Classifying existing datasets
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