-
Notifications
You must be signed in to change notification settings - Fork 280
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
1 changed file
with
7 additions
and
6 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -25,12 +25,12 @@ if (! tier1_project && (hostname.contains("genius") || hostname.contains("wice") | |
} | ||
|
||
|
||
// Reduce the job submit rate to about 30 per minute, this way the server won't be bombarded with jobs | ||
// Reduce the job submit rate to about 50 per minute, this way the server won't be bombarded with jobs | ||
// Limit queueSize to keep job rate under control and avoid timeouts | ||
executor { | ||
submitRateLimit = '50/1min' | ||
queueSize = 30 | ||
exitReadTimeout = "3day" | ||
exitReadTimeout = "10min" | ||
} | ||
|
||
// Add backoff strategy to catch cluster timeouts and proper symlinks of files in scratch to the work directory | ||
|
@@ -39,7 +39,7 @@ process { | |
stageOutMode = "rsync" | ||
errorStrategy = { sleep(Math.pow(2, task.attempt) * 200 as long); return 'retry' } | ||
maxRetries = 5 | ||
array = 10 | ||
// array = 50 | ||
} | ||
|
||
// Specify that singularity should be used and where the cache dir will be for the images | ||
|
@@ -91,12 +91,13 @@ profiles { | |
} | ||
} | ||
} | ||
clusterOptions = { "--cluster genius --account=$tier1_project" } | ||
clusterOptions = { "--clusters=genius --account=$tier1_project" } | ||
scratch = "$scratch_dir" | ||
} | ||
} | ||
|
||
wice { | ||
|
||
params { | ||
config_profile_description = 'HPC_WICE profile for use on the Wice cluster of the VSC HPC.' | ||
config_profile_contact = '[email protected]' | ||
|
@@ -126,7 +127,7 @@ profiles { | |
} | ||
} | ||
} | ||
clusterOptions = { "--cluster wice --account=$tier1_project" } | ||
clusterOptions = { "--clusters=wice --account=$tier1_project"} | ||
scratch = "$scratch_dir" | ||
} | ||
} | ||
|
@@ -144,7 +145,7 @@ profiles { | |
process { | ||
executor = 'slurm' | ||
queue = { task.time <= 72.h ? 'superdome' : 'superdome_long' } | ||
clusterOptions = { "--cluster genius --account=$tier1_project" } | ||
clusterOptions = {"--clusters=genius --account=$tier1_project"} | ||
scratch = "$scratch_dir" | ||
} | ||
} | ||
|