Dots cleanup and high-level API (#327)

- create a user-friendly API function for dot-calling `cooltools.api.dots` - simplify and refactor code in `cooltools.api.dotfinder`, remove legacy, etc - revised dotfinder FDR-stats to make sure q-values are monotonous - revised kernel recommendation and provided mechanism for custom kernels - added separate tests for dotfinder statistics - several small fixes - ready for pandas 1.4.0, new numba, some deprecations and warnings Co-authored-by: gfudenberg <[email protected]>
open2c · Mar 2, 2022 · 94b966e · 94b966e
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commit 94b966e
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diff --git a/cooltools/__init__.py b/cooltools/__init__.py
@@ -32,3 +32,4 @@
 from .api.snipping import pileup
 from .api.directionality import directionality
 from .api.insulation import insulation
+from .api.dotfinder import dots