DeepAR can be widely used for performing high-throughput identification of AR antagonists in an economic manner.
The packages that this program depends on are
scikit-learn==0.24.1 or higher
.
jpype1
torch==1.9.1
xgboost==0.90
You can run following command in terminal.
pip install scikit-learn==0.24.1
pip install jpype1
pip install torch==1.9.1
pip install xgboost==0.90
- Copy your SMILES file into
./input
and change the name to smiles.csv - Run command
python DeepAR.py
- The result including SMILE, label and probability will be saved in
./output/predicted_result.csv