Hi,
I've tried to read some single sample VCF files, do some filtering and merge them while writing the result as a sharded VCF. To do this I used my own header taken from an existing VCF file which I think contain the right headers with all the samples noted.
After that has been done, I try to read the result in a new dataframe but receive this error:
We never saw the required CHROM header line (starting with one #) for the input VCF file
However, that line exists in each part file (confirmed with bcftools).
Did you see this before?
Hi,
I've tried to read some single sample VCF files, do some filtering and merge them while writing the result as a sharded VCF. To do this I used my own header taken from an existing VCF file which I think contain the right headers with all the samples noted.
After that has been done, I try to read the result in a new dataframe but receive this error:
However, that line exists in each part file (confirmed with bcftools).
Did you see this before?