Reghbali remove dep inj #49
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Integration Test | |
| on: | |
| issue_comment: | |
| types: [created] | |
| jobs: | |
| integration_test_linux: | |
| name: integration-linux-cp${{ matrix.python-version }} | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ "3.9", "3.11"] | |
| steps: | |
| - uses: khan/pull-request-comment-trigger@master | |
| id: check-comment | |
| with: | |
| trigger: 'please run integration' | |
| reaction: rocket | |
| prefix_only: true | |
| env: | |
| GITHUB_TOKEN: '${{ secrets.GITHUB_TOKEN }}' | |
| - name: Get branch | |
| if: steps.check-comment.outputs.triggered == 'true' | |
| uses: xt0rted/pull-request-comment-branch@v2 | |
| id: comment-branch | |
| - name: Checkout | |
| if: steps.check-comment.outputs.triggered == 'true' | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ steps.comment-branch.outputs.head_ref }} | |
| - name: Post response to GitHub PR | |
| uses: mshick/add-pr-comment@v2 | |
| with: | |
| message: | | |
| Integration test started. Click [here](https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }}) to see the status. | |
| - name: Cache dependency binaries | |
| if: steps.check-comment.outputs.triggered == 'true' | |
| id: cache-bin | |
| uses: actions/cache@v3 | |
| with: | |
| key: bin | |
| path: | | |
| ~/.local/bin | |
| ~/.cache/pip | |
| - name: Setup Python | |
| if: steps.check-comment.outputs.triggered == 'true' | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version}} | |
| - name: Install test dependencies | |
| if: steps.check-comment.outputs.triggered == 'true' | |
| run: | | |
| export BIN=~/.local/bin | |
| pip install pytest | |
| mkdir -p $BIN | |
| cd /tmp | |
| if [[ ! -f $BIN/greedy ]]; then | |
| curl -o greedy.tgz -L https://sourceforge.net/projects/greedy-reg/files/Nightly/greedy-nightly-Linux-gcc64.tar.gz | |
| tar xf greedy.tgz | |
| cp greedy*/bin/greedy $BIN/greedy | |
| fi | |
| if [[ ! -f $BIN/c3d ]]; then | |
| curl -o c3d.tgz -L https://sourceforge.net/projects/c3d/files/c3d/Nightly/c3d-nightly-Linux-gcc64.tar.gz | |
| tar xf c3d.tgz | |
| cp c3d*/bin/c3d $BIN/c3d | |
| fi | |
| - name: Install package | |
| if: steps.check-comment.outputs.triggered == 'true' | |
| run: | | |
| pip install -e ".[ants]" | |
| - name: Download models | |
| if: steps.check-comment.outputs.triggered == 'true' | |
| run: | | |
| pyalfe download models | |
| - name: Run tests | |
| id: test | |
| if: steps.check-comment.outputs.triggered == 'true' | |
| run: | | |
| pytest tests/integration | |
| - name: React to comment with success | |
| uses: dkershner6/reaction-action@v1 | |
| if: steps.test.outcome == 'success' | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| commentId: ${{ github.event.comment.id }} | |
| reaction: "+1" | |
| - name: React to comment with failure | |
| uses: dkershner6/reaction-action@v1 | |
| if: steps.test.outcome != 'success' | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| commentId: ${{ github.event.comment.id }} | |
| reaction: "-1" |