Path resolve #39
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| name: Integration Test | |
| on: | |
| issue_comment: | |
| types: [created] | |
| jobs: | |
| integration_test_linux: | |
| name: integration-linux-cp${{ matrix.python-version }} | |
| if: ${{ github.event.issue.pull_request && contains(github.event.comment.body, 'please run integration') }} | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| python-version: [ "3.9", "3.11"] | |
| steps: | |
| - name: Get branch | |
| uses: xt0rted/pull-request-comment-branch@v2 | |
| id: comment-branch | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ steps.comment-branch.outputs.head_ref }} | |
| - name: Cache dependency binaries | |
| id: cache-bin | |
| uses: actions/cache@v3 | |
| with: | |
| key: bin | |
| path: | | |
| ~/.local/bin | |
| ~/.cache/pip | |
| - name: Setup Python | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version}} | |
| - name: Install test dependencies | |
| run: | | |
| export BIN=~/.local/bin | |
| pip install pytest | |
| mkdir -p $BIN | |
| cd /tmp | |
| if [[ ! -f $BIN/greedy ]]; then | |
| curl -o greedy.tgz -L https://sourceforge.net/projects/greedy-reg/files/Nightly/greedy-nightly-Linux-gcc64.tar.gz | |
| tar xf greedy.tgz | |
| cp greedy*/bin/greedy $BIN/greedy | |
| fi | |
| if [[ ! -f $BIN/c3d ]]; then | |
| curl -o c3d.tgz -L https://sourceforge.net/projects/c3d/files/c3d/Nightly/c3d-nightly-Linux-gcc64.tar.gz | |
| tar xf c3d.tgz | |
| cp c3d*/bin/c3d $BIN/c3d | |
| fi | |
| - name: Install package | |
| run: | | |
| pip install -e ".[ants]" | |
| - name: Download models | |
| run: | | |
| pyalfe download models | |
| - name: Run tests | |
| run: | | |
| pytest tests/integration |