Updated GUI enrichment page - now using pipeline function

saezlab · Nov 17, 2024 · 3b6e2c8 · 3b6e2c8
1 parent f3dde9f
commit 3b6e2c8
Showing 1 changed file with 2 additions and 5 deletions.
diff --git a/src/funki/pages/enrichment.py b/src/funki/pages/enrichment.py
@@ -20,8 +20,7 @@
 from utils.style import page_style
 from utils.style import header_style
 from funki import _colors
-import funki.analysis as fan
-import funki.plots as fpl
+import funki.pipelines as fppl
 
 
 org_taxid = [
@@ -341,7 +340,7 @@ def plot_enrich(n_clicks, data, gset_data, meth, gset):
 
     meth = meth if type(meth) is list else [meth]
 
-    fan.enrich(
+    fig = fppl.enrichment_analysis(
         dset,
         net,
         methods=[m for m in meth],
@@ -350,8 +349,6 @@ def plot_enrich(n_clicks, data, gset_data, meth, gset):
         weight='weight' if 'weight' in net.columns else None,
     )
 
-    fig = fpl.plot_enrich(dset)
-
     return fig, dataset_to_serial(dset)
 
 @callback(