Update utils_benchmark.py

convert grts to numpy array
saezlab · Jul 23, 2024 · 4ebdc64 · 4ebdc64
1 parent 31d9925
commit 4ebdc64
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/decoupler/utils_benchmark.py b/decoupler/utils_benchmark.py
@@ -332,7 +332,7 @@ def format_acts_grts(res, obs, groupby, use_pval):
     grts = build_grts_mat(obs, exps, srcs)
 
     # Match to same srcs between acts and grts
-    grts = match(srcs, grts.columns, grts.T).T
+    grts = match(srcs, grts.columns, grts.T.values).T
 
     # Build msks tensor
     msks, grpbys, grps = build_msks_tensor(obs, groupby)