QCB 455 Fall 2021

This repository contains my assignment submissions for QCB 455/MOL 455/COS 551 Introduction to Genomics and Computational Molecular Biology.

Contents

• Assignments/ - Directory containing the source files for each assignment, including the corresponding assignment specifications. Individual problem sets are located in subfolders and denoted using the number of the assignment:

.
└── Assignments
    ├── final_project
    ├── hw0
    ├── hw1
    ├── hw2
    ├── hw3
    └── hw4

Final Project

The final project constituted a substantial (45% of the final grade) effort that reproduced part of an existing paper (Analysis of SARS-CoV-2 mutations in the United States suggests presence of four substrains and novel variants)¹. The complete writeup and source files can found on arXiv (https://arxiv.org/abs/2112.07770) or in the final_project/ directory.

License

MIT

Footnotes

1. Wang, R. et al. Analysis of SARS-CoV-2 mutations in the united states suggests presence of four substrains and novel variants. Communications Biology 4, 228 (2021). ↩