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Add functionality to save stitched image as h5 or zarr #14

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merged 23 commits into from
Oct 28, 2024

Allow downscaling in z for pyramid construction

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Merged

Add functionality to save stitched image as h5 or zarr #14

Allow downscaling in z for pyramid construction
7c6fab0
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Codecov / codecov/patch succeeded Sep 10, 2024 in 0s

97.80% of diff hit (target 96.89%)

View this Pull Request on Codecov

97.80% of diff hit (target 96.89%)

Annotations

Check warning on line 446 in brainglobe_stitch/file_utils.py

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@codecov codecov / codecov/patch

brainglobe_stitch/file_utils.py#L446 

Added line #L446 was not covered by tests

Check warning on line 453 in brainglobe_stitch/image_mosaic.py

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@codecov codecov / codecov/patch

brainglobe_stitch/image_mosaic.py#L453 

Added line #L453 was not covered by tests

Check warning on line 471 in brainglobe_stitch/image_mosaic.py

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@codecov codecov / codecov/patch

brainglobe_stitch/image_mosaic.py#L471 

Added line #L471 was not covered by tests

Check warning on line 282 in brainglobe_stitch/stitching_widget.py

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@codecov codecov / codecov/patch

brainglobe_stitch/stitching_widget.py#L282 

Added line #L282 was not covered by tests
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